Sounds like you have a problem then Briz
I know it's a little late now for change but if you keep having problems the following may be interesting for you.
Many moons ago when we were experimenting with a Methanol powered 1500cc Supercharged pre-war race engine we found that if we ran a big SU on the inlet side of the blower (or turbo in your case) we got a much better power output than running "blow through" this we concluded was due to the high latent heat of vaporisation of the Methanol being given time to "do it's job" by cooling not only the intake charge directly but it actually cooled the blower unit so well that we were getting heavy condensation buildup on the outside of the blower its self. When run with blow through the blower got very hot and power was hit substantially. Even worse, when run on petrol with this setup the blower was so hot it caused many problems that limited boost and power enormously.
Not only this but the engine was a lot less sensitive to mixture and ran within 2% of max power from lambda 0.85 to 0.65 which is extremely rich indeed! We put this down to better atomisation "through the blender" You also completely do away with the need for the intercooler and associated long pipework / weight.
If you are worried about the turbo not handling vacuum then you can run a butterfly up by the head and the carb back at the turbo inlet, this works fine but you will need a "wet" blowoff valve to stop surge when shutting off the throttle.
Good luck anyway, the bike is looking really great!!
Julian